Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Slc22a28B2RT89 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Gm24589-201ENSMUST00000116692 94 ntBASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Gm7153-201ENSMUST00000117092 455 ntBASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Gm10060-201ENSMUST00000212002 111 ntBASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Slc22a28B2RT89 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Gm9103-201ENSMUST00000119371 405 ntBASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Gm7977-201ENSMUST00000193787 748 ntBASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Slc22a28B2RT89 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Slc22a28B2RT89 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.46□□□□□ -0.25
Slc22a28B2RT89 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Slc22a28B2RT89 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Slc22a28B2RT89 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc22a28B2RT89 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc22a28B2RT89 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Slc22a28B2RT89 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Slc22a28B2RT89 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms