Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chd3B1AR17 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chd3B1AR17 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.29□□□□□ -0.12
Chd3B1AR17 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.29□□□□□ -0.12
Chd3B1AR17 Gm14767-201ENSMUST00000121559 586 ntBASIC14.29□□□□□ -0.12
Chd3B1AR17 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.29□□□□□ -0.12
Chd3B1AR17 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.29□□□□□ -0.12
Chd3B1AR17 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.29□□□□□ -0.12
Chd3B1AR17 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.29□□□□□ -0.12
Chd3B1AR17 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Chd3B1AR17 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chd3B1AR17 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chd3B1AR17 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.28□□□□□ -0.12
Chd3B1AR17 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.28□□□□□ -0.12
Chd3B1AR17 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chd3B1AR17 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.28□□□□□ -0.12
Chd3B1AR17 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Mir6977-201ENSMUST00000184960 64 ntBASIC14.28□□□□□ -0.12
Chd3B1AR17 Gm44344-201ENSMUST00000200287 129 ntBASIC14.28□□□□□ -0.12
Chd3B1AR17 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.28□□□□□ -0.12
Chd3B1AR17 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chd3B1AR17 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.28□□□□□ -0.12
Chd3B1AR17 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.28□□□□□ -0.12
Chd3B1AR17 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.28□□□□□ -0.12
Chd3B1AR17 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chd3B1AR17 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd3B1AR17 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd3B1AR17 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Chd3B1AR17 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Chd3B1AR17 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.27□□□□□ -0.12
Chd3B1AR17 Gm6888-201ENSMUST00000221983 706 ntBASIC14.27□□□□□ -0.12
Chd3B1AR17 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chd3B1AR17 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.27□□□□□ -0.12
Chd3B1AR17 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.27□□□□□ -0.12
Chd3B1AR17 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chd3B1AR17 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Chd3B1AR17 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd3B1AR17 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd3B1AR17 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chd3B1AR17 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd3B1AR17 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd3B1AR17 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chd3B1AR17 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.27□□□□□ -0.13
Chd3B1AR17 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chd3B1AR17 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.27□□□□□ -0.13
Chd3B1AR17 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd3B1AR17 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd3B1AR17 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd3B1AR17 Gm22189-201ENSMUST00000103822 86 ntBASIC14.27□□□□□ -0.13
Chd3B1AR17 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Chd3B1AR17 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chd3B1AR17 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chd3B1AR17 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd3B1AR17 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.27□□□□□ -0.13
Chd3B1AR17 Gm7775-201ENSMUST00000218871 853 ntBASIC14.27□□□□□ -0.13
Chd3B1AR17 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd3B1AR17 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Chd3B1AR17 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd3B1AR17 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.27□□□□□ -0.13
Chd3B1AR17 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chd3B1AR17 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Chd3B1AR17 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms