Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm8959-201ENSMUST00000213150 571 ntBASIC10.9□□□□□ -0.66
Col6a5A6H584 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.9□□□□□ -0.66
Col6a5A6H584 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.9□□□□□ -0.66
Col6a5A6H584 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.9□□□□□ -0.66
Col6a5A6H584 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm11628-201ENSMUST00000117568 171 ntBASIC10.9□□□□□ -0.66
Col6a5A6H584 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm5523-201ENSMUST00000180415 997 ntBASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm27682-201ENSMUST00000183930 110 ntBASIC10.9□□□□□ -0.66
Col6a5A6H584 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.9□□□□□ -0.66
Col6a5A6H584 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col6a5A6H584 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Col6a5A6H584 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a5A6H584 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a5A6H584 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a5A6H584 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a5A6H584 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC10.9□□□□□ -0.67
Col6a5A6H584 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col6a5A6H584 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Col6a5A6H584 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
Col6a5A6H584 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col6a5A6H584 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC10.89□□□□□ -0.67
Col6a5A6H584 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Gm20482-202ENSMUST00000174729 825 ntBASIC10.89□□□□□ -0.67
Col6a5A6H584 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Col6a5A6H584 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC10.89□□□□□ -0.67
Col6a5A6H584 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Col6a5A6H584 Gm37835-201ENSMUST00000193305 361 ntBASIC10.89□□□□□ -0.67
Col6a5A6H584 Gm38671-201ENSMUST00000200573 130 ntBASIC10.89□□□□□ -0.67
Col6a5A6H584 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Col6a5A6H584 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Col6a5A6H584 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Col6a5A6H584 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Col6a5A6H584 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Col6a5A6H584 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Col6a5A6H584 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Gm11803-201ENSMUST00000119966 444 ntBASIC10.88□□□□□ -0.67
Col6a5A6H584 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.88□□□□□ -0.67
Col6a5A6H584 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.88□□□□□ -0.67
Col6a5A6H584 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Col6a5A6H584 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Col6a5A6H584 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Col6a5A6H584 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Col6a5A6H584 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms