Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Gm11439-201ENSMUST00000118598 409 ntBASIC11.72□□□□□ -0.53
Chd6A3KFM7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.72□□□□□ -0.53
Chd6A3KFM7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.72□□□□□ -0.53
Chd6A3KFM7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd6A3KFM7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Gm9540-201ENSMUST00000188230 478 ntBASIC11.71□□□□□ -0.53
Chd6A3KFM7 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.71□□□□□ -0.53
Chd6A3KFM7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd6A3KFM7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.71□□□□□ -0.54
Chd6A3KFM7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd6A3KFM7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Gm8194-201ENSMUST00000159783 859 ntBASIC11.7□□□□□ -0.54
Chd6A3KFM7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Gm15393-201ENSMUST00000120499 219 ntBASIC11.7□□□□□ -0.54
Chd6A3KFM7 Gm16479-201ENSMUST00000121706 932 ntBASIC11.7□□□□□ -0.54
Chd6A3KFM7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Gm18212-201ENSMUST00000211678 889 ntBASIC11.7□□□□□ -0.54
Chd6A3KFM7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.7□□□□□ -0.54
Chd6A3KFM7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Chd6A3KFM7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms