Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Scn1aA2APX8 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.24■□□□□ 0.03
Scn1aA2APX8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.24■□□□□ 0.03
Scn1aA2APX8 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.24■□□□□ 0.03
Scn1aA2APX8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.24■□□□□ 0.03
Scn1aA2APX8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Scn1aA2APX8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Gm2423-201ENSMUST00000074863 733 ntBASIC15.23■□□□□ 0.03
Scn1aA2APX8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.23■□□□□ 0.03
Scn1aA2APX8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Scn1aA2APX8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.23■□□□□ 0.03
Scn1aA2APX8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn1aA2APX8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.22■□□□□ 0.03
Scn1aA2APX8 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.22■□□□□ 0.03
Scn1aA2APX8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.22■□□□□ 0.03
Scn1aA2APX8 Gm4875-201ENSMUST00000118257 786 ntBASIC15.22■□□□□ 0.03
Scn1aA2APX8 Gm14042-201ENSMUST00000120139 833 ntBASIC15.22■□□□□ 0.03
Scn1aA2APX8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Gm3436-201ENSMUST00000179930 840 ntBASIC15.22■□□□□ 0.03
Scn1aA2APX8 Gm33320-201ENSMUST00000192232 530 ntBASIC15.22■□□□□ 0.03
Scn1aA2APX8 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.22■□□□□ 0.03
Scn1aA2APX8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn1aA2APX8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn1aA2APX8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Gm15487-201ENSMUST00000122373 465 ntBASIC15.21■□□□□ 0.03
Scn1aA2APX8 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.21■□□□□ 0.03
Scn1aA2APX8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms