Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm12151-201ENSMUST00000121374 290 ntBASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Mir8102-201ENSMUST00000184148 139 ntBASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.47■□□□□ 0.39
Cfap99A0A140LIX9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cfap99A0A140LIX9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cfap99A0A140LIX9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Cfap99A0A140LIX9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cfap99A0A140LIX9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Gm8410-201ENSMUST00000117225 605 ntBASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Gm27989-201ENSMUST00000184721 107 ntBASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cfap99A0A140LIX9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms