Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv29A0A0G2LB96 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv29A0A0G2LB96 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv29A0A0G2LB96 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trbv29A0A0G2LB96 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv29A0A0G2LB96 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv29A0A0G2LB96 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv29A0A0G2LB96 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv29A0A0G2LB96 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv29A0A0G2LB96 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv29A0A0G2LB96 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv29A0A0G2LB96 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv29A0A0G2LB96 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv29A0A0G2LB96 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.47
Trbv29A0A0G2LB96 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv29A0A0G2LB96 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.47
Trbv29A0A0G2LB96 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trbv29A0A0G2LB96 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Trbv29A0A0G2LB96 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Trbv29A0A0G2LB96 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Trbv29A0A0G2LB96 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trbv29A0A0G2LB96 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Trbv29A0A0G2LB96 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv29A0A0G2LB96 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.12□□□□□ -0.47
Trbv29A0A0G2LB96 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv29A0A0G2LB96 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv29A0A0G2LB96 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv29A0A0G2LB96 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv29A0A0G2LB96 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv29A0A0G2LB96 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trbv29A0A0G2LB96 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv29A0A0G2LB96 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv29A0A0G2LB96 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv29A0A0G2LB96 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms