Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm16198-201ENSMUST00000118766 670 ntBASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Efs-202ENSMUST00000227037 2540 ntBASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm11745-201ENSMUST00000121669 448 ntBASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rprl2-201ENSMUST00000157150 290 ntBASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm45612-201ENSMUST00000211320 160 ntBASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms