Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ighv1-47A0A0A6YY41 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-47A0A0A6YY41 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ighv1-47A0A0A6YY41 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ighv1-47A0A0A6YY41 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gm7461-201ENSMUST00000058918 827 ntBASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Ighv1-47A0A0A6YY41 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-47A0A0A6YY41 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms