Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-5A0A075B6B9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-5A0A075B6B9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-5A0A075B6B9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-5A0A075B6B9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-5A0A075B6B9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-5A0A075B6B9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-5A0A075B6B9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-5A0A075B6B9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav6d-5A0A075B6B9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm13464-201ENSMUST00000119418 935 ntBASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-5A0A075B6B9 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms