Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Gm45328-201ENSMUST00000210942 917 ntBASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav6-5A0A075B6B5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav6-5A0A075B6B5 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Gm14042-201ENSMUST00000120139 833 ntBASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Gm10812-201ENSMUST00000099864 546 ntBASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav6-5A0A075B6B5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms