Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm8520-201ENSMUST00000186517 868 ntBASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Acot6-202ENSMUST00000222921 3622 ntBASIC10.75□□□□□ -0.69
Trav16d-dv11A0A075B617 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Mir770-201ENSMUST00000103252 94 ntBASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav16d-dv11A0A075B617 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Gm8318-201ENSMUST00000182954 872 ntBASIC10.73□□□□□ -0.69
Trav16d-dv11A0A075B617 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms