Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Gm15590-201ENSMUST00000078419 552 ntBASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav9-1A0A075B601 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Gm13036-201ENSMUST00000117799 748 ntBASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav9-1A0A075B601 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav9-1A0A075B601 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms