Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Upk1bQ9Z2C6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1bQ9Z2C6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1bQ9Z2C6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1bQ9Z2C6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Upk1bQ9Z2C6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Upk1bQ9Z2C6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk1bQ9Z2C6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk1bQ9Z2C6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Upk1bQ9Z2C6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Upk1bQ9Z2C6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Gm18489-201ENSMUST00000172565 551 ntBASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Upk1bQ9Z2C6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Gm6659-201ENSMUST00000174752 547 ntBASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Upk1bQ9Z2C6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms