Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.15■□□□□ 0.02
Smarcb1Q9Z0H3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.02
Smarcb1Q9Z0H3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Smarcb1Q9Z0H3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smarcb1Q9Z0H3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Mir1897-201ENSMUST00000122581 272 ntBASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Gm3436-201ENSMUST00000179930 840 ntBASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcb1Q9Z0H3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Gm14042-201ENSMUST00000120139 833 ntBASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms