Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CcsQ9WU84 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CcsQ9WU84 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
CcsQ9WU84 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
CcsQ9WU84 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
CcsQ9WU84 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
CcsQ9WU84 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
CcsQ9WU84 Gm36967-201ENSMUST00000193814 266 ntBASIC11.4□□□□□ -0.58
CcsQ9WU84 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.4□□□□□ -0.58
CcsQ9WU84 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CcsQ9WU84 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.4□□□□□ -0.58
CcsQ9WU84 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.4□□□□□ -0.58
CcsQ9WU84 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CcsQ9WU84 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CcsQ9WU84 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
CcsQ9WU84 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CcsQ9WU84 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CcsQ9WU84 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CcsQ9WU84 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
CcsQ9WU84 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CcsQ9WU84 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CcsQ9WU84 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Gm24589-201ENSMUST00000116692 94 ntBASIC11.39□□□□□ -0.59
CcsQ9WU84 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.39□□□□□ -0.59
CcsQ9WU84 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.39□□□□□ -0.59
CcsQ9WU84 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Gm34391-201ENSMUST00000203706 907 ntBASIC11.39□□□□□ -0.59
CcsQ9WU84 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.39□□□□□ -0.59
CcsQ9WU84 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.39□□□□□ -0.59
CcsQ9WU84 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CcsQ9WU84 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CcsQ9WU84 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CcsQ9WU84 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CcsQ9WU84 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
CcsQ9WU84 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
CcsQ9WU84 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.39□□□□□ -0.59
CcsQ9WU84 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CcsQ9WU84 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcsQ9WU84 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcsQ9WU84 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcsQ9WU84 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcsQ9WU84 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
CcsQ9WU84 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms