Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim3Q9R1R2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Gm2213-201ENSMUST00000197485 688 ntBASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.78□□□□□ -0.2
Trim3Q9R1R2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim3Q9R1R2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim3Q9R1R2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim3Q9R1R2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim3Q9R1R2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trim3Q9R1R2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trim3Q9R1R2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
Trim3Q9R1R2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim3Q9R1R2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trim3Q9R1R2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim3Q9R1R2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms