Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col13a1Q9R1N9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Gm15321-201ENSMUST00000121290 288 ntBASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Gm10499-201ENSMUST00000174094 934 ntBASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col13a1Q9R1N9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Gm13829-201ENSMUST00000119600 138 ntBASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Gm18737-201ENSMUST00000173594 937 ntBASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Gm44344-201ENSMUST00000200287 129 ntBASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Gm43630-201ENSMUST00000201550 776 ntBASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Gm18049-201ENSMUST00000208909 581 ntBASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Gm9908-201ENSMUST00000211534 448 ntBASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col13a1Q9R1N9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.46□□□□□ -0.42
Col13a1Q9R1N9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col13a1Q9R1N9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col13a1Q9R1N9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col13a1Q9R1N9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col13a1Q9R1N9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col13a1Q9R1N9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col13a1Q9R1N9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col13a1Q9R1N9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Col13a1Q9R1N9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Gm15483-201ENSMUST00000120338 456 ntBASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col13a1Q9R1N9 Gm12091-201ENSMUST00000146791 830 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms