Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clcf1Q9QZM3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clcf1Q9QZM3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Clcf1Q9QZM3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clcf1Q9QZM3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.27□□□□□ -0.28
Clcf1Q9QZM3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clcf1Q9QZM3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clcf1Q9QZM3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.27□□□□□ -0.28
Clcf1Q9QZM3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Clcf1Q9QZM3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.27□□□□□ -0.28
Clcf1Q9QZM3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clcf1Q9QZM3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Clcf1Q9QZM3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Clcf1Q9QZM3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Gm18889-201ENSMUST00000174284 929 ntBASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Mir6990-201ENSMUST00000183724 91 ntBASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Gm44335-201ENSMUST00000196879 141 ntBASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Gm44297-201ENSMUST00000198304 141 ntBASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Gm44346-201ENSMUST00000198851 141 ntBASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms