Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Gm43811-201ENSMUST00000202862 695 ntBASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Gm26226-201ENSMUST00000082509 116 ntBASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Msh5Q9QUM7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Gm5682-201ENSMUST00000173402 505 ntBASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Mir5131-201ENSMUST00000175426 93 ntBASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Gm43550-201ENSMUST00000200597 303 ntBASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 CT025552.1-201ENSMUST00000224561 521 ntBASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Msh5Q9QUM7 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Msh5Q9QUM7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms