Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crlf1Q9JM58 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Crlf1Q9JM58 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.69□□□□□ -0.54
Crlf1Q9JM58 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Crlf1Q9JM58 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Crlf1Q9JM58 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Gm14660-201ENSMUST00000119809 575 ntBASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.67□□□□□ -0.54
Crlf1Q9JM58 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Gm27731-201ENSMUST00000185192 107 ntBASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.66□□□□□ -0.54
Crlf1Q9JM58 Gm33320-201ENSMUST00000192232 530 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms