Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ldb3Q9JKS4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Gm2810-201ENSMUST00000118681 990 ntBASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Gm18889-201ENSMUST00000174284 929 ntBASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Gm37935-201ENSMUST00000192012 982 ntBASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Gm2756-201ENSMUST00000195851 400 ntBASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb3Q9JKS4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Gm18737-201ENSMUST00000173594 937 ntBASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Gm27702-201ENSMUST00000184512 56 ntBASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Gm9182-201ENSMUST00000217829 639 ntBASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ldb3Q9JKS4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ldb3Q9JKS4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ldb3Q9JKS4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ldb3Q9JKS4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ldb3Q9JKS4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ldb3Q9JKS4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ldb3Q9JKS4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ldb3Q9JKS4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ldb3Q9JKS4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ldb3Q9JKS4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms