Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm4984-201ENSMUST00000115987 360 ntBASIC16.41■□□□□ 0.22
Cacna1fQ9JIS7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1fQ9JIS7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1fQ9JIS7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1fQ9JIS7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1fQ9JIS7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1fQ9JIS7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1fQ9JIS7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1fQ9JIS7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1fQ9JIS7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1fQ9JIS7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cacna1fQ9JIS7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Gm15376-201ENSMUST00000122258 783 ntBASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Gm21470-201ENSMUST00000187680 696 ntBASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Gm43630-201ENSMUST00000201550 776 ntBASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cacna1fQ9JIS7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Cacna1fQ9JIS7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Gm15806-201ENSMUST00000120696 955 ntBASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Gm28911-201ENSMUST00000188837 117 ntBASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cacna1fQ9JIS7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Gm6244-201ENSMUST00000178732 841 ntBASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cacna1fQ9JIS7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Gm13689-201ENSMUST00000119360 685 ntBASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Mir497b-201ENSMUST00000093601 125 ntBASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms