Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Dap3Q9ER88 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.46□□□□□ -0.25
Dap3Q9ER88 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.46□□□□□ -0.25
Dap3Q9ER88 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.46□□□□□ -0.25
Dap3Q9ER88 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Dap3Q9ER88 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.46□□□□□ -0.26
Dap3Q9ER88 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.45□□□□□ -0.26
Dap3Q9ER88 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.45□□□□□ -0.26
Dap3Q9ER88 Gm12644-201ENSMUST00000119935 606 ntBASIC13.45□□□□□ -0.26
Dap3Q9ER88 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Gm17807-201ENSMUST00000186869 298 ntBASIC13.45□□□□□ -0.26
Dap3Q9ER88 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.45□□□□□ -0.26
Dap3Q9ER88 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Dap3Q9ER88 Celf4-206ENSMUST00000224553 1729 ntBASIC13.44□□□□□ -0.26
Dap3Q9ER88 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.44□□□□□ -0.26
Dap3Q9ER88 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dap3Q9ER88 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dap3Q9ER88 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dap3Q9ER88 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dap3Q9ER88 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms