Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Gm2756-201ENSMUST00000195851 400 ntBASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp2aQ9DB34 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Gm27494-201ENSMUST00000184735 189 ntBASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chmp2aQ9DB34 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.27■□□□□ 0.03
Chmp2aQ9DB34 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2aQ9DB34 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2aQ9DB34 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2aQ9DB34 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2aQ9DB34 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2aQ9DB34 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2aQ9DB34 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2aQ9DB34 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2aQ9DB34 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.27■□□□□ 0.03
Chmp2aQ9DB34 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp2aQ9DB34 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Gm23935-201ENSMUST00000102303 57 ntBASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Gm24270-201ENSMUST00000102326 57 ntBASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Gm24245-201ENSMUST00000157318 57 ntBASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chmp2aQ9DB34 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp2aQ9DB34 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms