Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Gm8520-201ENSMUST00000186517 868 ntBASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Sf3a3Q9D554 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Gm15039-201ENSMUST00000118914 875 ntBASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Sf3a3Q9D554 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3a3Q9D554 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3a3Q9D554 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3a3Q9D554 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.83□□□□□ -0.03
Sf3a3Q9D554 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3a3Q9D554 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3a3Q9D554 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.83□□□□□ -0.03
Sf3a3Q9D554 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3a3Q9D554 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3a3Q9D554 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3a3Q9D554 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.83□□□□□ -0.03
Sf3a3Q9D554 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Gm22697-201ENSMUST00000175194 63 ntBASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3a3Q9D554 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms