Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d3Q9CSV6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d3Q9CSV6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d3Q9CSV6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d3Q9CSV6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d3Q9CSV6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d3Q9CSV6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d3Q9CSV6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sft2d3Q9CSV6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.51□□□□□ -0.41
Sft2d3Q9CSV6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Thap2-203ENSMUST00000218989 527 ntBASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sft2d3Q9CSV6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sft2d3Q9CSV6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Gm15427-201ENSMUST00000117288 531 ntBASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Mir1895-201ENSMUST00000122615 79 ntBASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Gm11025-201ENSMUST00000140773 466 ntBASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Gm45747-201ENSMUST00000212203 999 ntBASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Chchd1-203ENSMUST00000224633 557 ntBASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d3Q9CSV6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms