Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Gm18595-201ENSMUST00000175736 1068 ntBASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Gm37629-201ENSMUST00000193635 1050 ntBASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 AC154757.2-201ENSMUST00000228885 743 ntBASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Gm26226-201ENSMUST00000082509 116 ntBASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retreg3Q9CQV4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Gm27494-201ENSMUST00000184735 189 ntBASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Gm2451-201ENSMUST00000199447 999 ntBASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Gm10290-201ENSMUST00000200451 999 ntBASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retreg3Q9CQV4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retreg3Q9CQV4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Retreg3Q9CQV4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg3Q9CQV4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retreg3Q9CQV4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms