Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Gm43433-201ENSMUST00000196573 481 ntBASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Gm9063-201ENSMUST00000223299 582 ntBASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Shd-206ENSMUST00000225145 998 ntBASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf8Q99PV0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12□□□□□ -0.49
Prpf8Q99PV0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12□□□□□ -0.49
Prpf8Q99PV0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Prpf8Q99PV0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Prpf8Q99PV0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Prpf8Q99PV0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12□□□□□ -0.49
Prpf8Q99PV0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm5566-201ENSMUST00000116118 459 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12□□□□□ -0.49
Prpf8Q99PV0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm29310-201ENSMUST00000185468 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21825-201ENSMUST00000185728 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm29109-201ENSMUST00000185895 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21896-201ENSMUST00000186520 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21873-201ENSMUST00000186728 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21794-201ENSMUST00000187056 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21880-201ENSMUST00000187275 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21826-201ENSMUST00000187451 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21198-201ENSMUST00000188393 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21749-201ENSMUST00000189343 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21901-201ENSMUST00000189568 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm29424-201ENSMUST00000189716 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm28599-201ENSMUST00000189838 694 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21867-201ENSMUST00000189917 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm29269-201ENSMUST00000190087 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21722-201ENSMUST00000190153 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm28423-201ENSMUST00000190701 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21899-201ENSMUST00000190745 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21910-201ENSMUST00000191163 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21849-201ENSMUST00000191571 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm28678-201ENSMUST00000191593 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm20910-201ENSMUST00000193268 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm21871-201ENSMUST00000194621 696 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm44344-201ENSMUST00000200287 129 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Gm44719-201ENSMUST00000206404 149 ntBASIC12□□□□□ -0.49
Prpf8Q99PV0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf8Q99PV0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf8Q99PV0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf8Q99PV0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf8Q99PV0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf8Q99PV0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prpf8Q99PV0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.99□□□□□ -0.49
Prpf8Q99PV0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms