Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim8Q99PJ2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Gm43347-201ENSMUST00000200226 580 ntBASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim8Q99PJ2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.34□□□□□ -0.11
Trim8Q99PJ2 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.34□□□□□ -0.11
Trim8Q99PJ2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim8Q99PJ2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim8Q99PJ2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim8Q99PJ2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.33□□□□□ -0.11
Trim8Q99PJ2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Trim8Q99PJ2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim8Q99PJ2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim8Q99PJ2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.33□□□□□ -0.11
Trim8Q99PJ2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim8Q99PJ2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim8Q99PJ2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Gm9682-201ENSMUST00000197505 556 ntBASIC14.33□□□□□ -0.12
Trim8Q99PJ2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms