Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh15Q99PJ1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Gm15808-201ENSMUST00000119046 604 ntBASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Gm10156-201ENSMUST00000122364 462 ntBASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Gm43818-201ENSMUST00000200605 466 ntBASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh15Q99PJ1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Gm22323-201ENSMUST00000103832 109 ntBASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Gm8213-201ENSMUST00000118191 441 ntBASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Gm12176-201ENSMUST00000121420 875 ntBASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh15Q99PJ1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Gm44397-201ENSMUST00000195950 113 ntBASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Snora73a-201ENSMUST00000082453 205 ntBASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Gm8706-201ENSMUST00000197372 1491 ntBASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Mir686-201ENSMUST00000102174 109 ntBASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh15Q99PJ1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.21■□□□□ 0.18
Pcdh15Q99PJ1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdh15Q99PJ1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdh15Q99PJ1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Gm38223-201ENSMUST00000194484 695 ntBASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh15Q99PJ1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcdh15Q99PJ1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdh15Q99PJ1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdh15Q99PJ1 Gm7029-201ENSMUST00000173226 450 ntBASIC16.19■□□□□ 0.18
Pcdh15Q99PJ1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.19■□□□□ 0.18
Pcdh15Q99PJ1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms