Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn4Q99P72 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn4Q99P72 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn4Q99P72 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn4Q99P72 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Gm20239-201ENSMUST00000196610 982 ntBASIC18.83■□□□□ 0.6
Rtn4Q99P72 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.83■□□□□ 0.6
Rtn4Q99P72 Zmym2-202ENSMUST00000223669 1281 ntBASIC18.83■□□□□ 0.6
Rtn4Q99P72 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.83■□□□□ 0.6
Rtn4Q99P72 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn4Q99P72 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.82■□□□□ 0.6
Rtn4Q99P72 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Gm12008-201ENSMUST00000117791 755 ntBASIC18.82■□□□□ 0.6
Rtn4Q99P72 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.82■□□□□ 0.6
Rtn4Q99P72 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rtn4Q99P72 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.82■□□□□ 0.6
Rtn4Q99P72 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Rtn4Q99P72 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.81■□□□□ 0.6
Rtn4Q99P72 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.81■□□□□ 0.6
Rtn4Q99P72 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.81■□□□□ 0.6
Rtn4Q99P72 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn4Q99P72 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.81■□□□□ 0.6
Rtn4Q99P72 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.8■□□□□ 0.6
Rtn4Q99P72 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Gm7441-201ENSMUST00000220697 1074 ntBASIC18.8■□□□□ 0.6
Rtn4Q99P72 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rtn4Q99P72 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms