Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tlr3Q99MB1 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.71■□□□□ 0.11
Tlr3Q99MB1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.71■□□□□ 0.11
Tlr3Q99MB1 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.71■□□□□ 0.11
Tlr3Q99MB1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tlr3Q99MB1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tlr3Q99MB1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tlr3Q99MB1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tlr3Q99MB1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tlr3Q99MB1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Tlr3Q99MB1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tlr3Q99MB1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tlr3Q99MB1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tlr3Q99MB1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Gm27494-201ENSMUST00000184735 189 ntBASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tlr3Q99MB1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Olfr286-202ENSMUST00000205305 969 ntBASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tlr3Q99MB1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Gm23547-201ENSMUST00000158210 271 ntBASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Mir6956-201ENSMUST00000183598 62 ntBASIC15.68■□□□□ 0.1
Tlr3Q99MB1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.68■□□□□ 0.1
Tlr3Q99MB1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tlr3Q99MB1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms