Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rab28Q99KL7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.13□□□□□ -0.15
Rab28Q99KL7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Gm18049-201ENSMUST00000208909 581 ntBASIC14.13□□□□□ -0.15
Rab28Q99KL7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
Rab28Q99KL7 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.13□□□□□ -0.15
Rab28Q99KL7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.13□□□□□ -0.15
Rab28Q99KL7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab28Q99KL7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Gm7774-201ENSMUST00000200064 533 ntBASIC14.12□□□□□ -0.15
Rab28Q99KL7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.12□□□□□ -0.15
Rab28Q99KL7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Rab28Q99KL7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.12□□□□□ -0.15
Rab28Q99KL7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.12□□□□□ -0.15
Rab28Q99KL7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rab28Q99KL7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Mir449b-201ENSMUST00000104833 80 ntBASIC14.11□□□□□ -0.15
Rab28Q99KL7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.11□□□□□ -0.15
Rab28Q99KL7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rab28Q99KL7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms