Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd2Q99JR8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Smarcd2Q99JR8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd2Q99JR8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smarcd2Q99JR8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smarcd2Q99JR8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Gm12585-201ENSMUST00000117307 290 ntBASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Gm33320-201ENSMUST00000192232 530 ntBASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smarcd2Q99JR8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smarcd2Q99JR8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms