Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Col20a1Q923P0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.23■□□□□ 0.35
Col20a1Q923P0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.23■□□□□ 0.35
Col20a1Q923P0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.23■□□□□ 0.35
Col20a1Q923P0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Gm5866-201ENSMUST00000177881 973 ntBASIC17.23■□□□□ 0.35
Col20a1Q923P0 Gm46209-201ENSMUST00000217912 553 ntBASIC17.23■□□□□ 0.35
Col20a1Q923P0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Col20a1Q923P0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col20a1Q923P0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Gm3436-201ENSMUST00000179930 840 ntBASIC17.21■□□□□ 0.35
Col20a1Q923P0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.21■□□□□ 0.35
Col20a1Q923P0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Col20a1Q923P0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col20a1Q923P0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col20a1Q923P0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.21■□□□□ 0.34
Col20a1Q923P0 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.21■□□□□ 0.34
Col20a1Q923P0 Gm43703-201ENSMUST00000200523 763 ntBASIC17.21■□□□□ 0.34
Col20a1Q923P0 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.21■□□□□ 0.34
Col20a1Q923P0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col20a1Q923P0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Col20a1Q923P0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Col20a1Q923P0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Col20a1Q923P0 Mir125a-201ENSMUST00000083545 68 ntBASIC17.21■□□□□ 0.34
Col20a1Q923P0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Col20a1Q923P0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.2■□□□□ 0.34
Col20a1Q923P0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.2■□□□□ 0.34
Col20a1Q923P0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms