Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Gm18737-201ENSMUST00000173594 937 ntBASIC16.91■□□□□ 0.3
Smc1bQ920F6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.91■□□□□ 0.3
Smc1bQ920F6 Gm38294-201ENSMUST00000192831 381 ntBASIC16.91■□□□□ 0.3
Smc1bQ920F6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Gm7730-201ENSMUST00000212486 454 ntBASIC16.91■□□□□ 0.3
Smc1bQ920F6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.91■□□□□ 0.3
Smc1bQ920F6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc1bQ920F6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.9■□□□□ 0.3
Smc1bQ920F6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Gm7488-201ENSMUST00000117148 684 ntBASIC16.9■□□□□ 0.3
Smc1bQ920F6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Gm9824-201ENSMUST00000178707 561 ntBASIC16.9■□□□□ 0.3
Smc1bQ920F6 Gm7653-201ENSMUST00000214567 508 ntBASIC16.9■□□□□ 0.3
Smc1bQ920F6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smc1bQ920F6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smc1bQ920F6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smc1bQ920F6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smc1bQ920F6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smc1bQ920F6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.89■□□□□ 0.29
Smc1bQ920F6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.89■□□□□ 0.29
Smc1bQ920F6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.89■□□□□ 0.29
Smc1bQ920F6 Gm6888-201ENSMUST00000221983 706 ntBASIC16.89■□□□□ 0.29
Smc1bQ920F6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.89■□□□□ 0.29
Smc1bQ920F6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc1bQ920F6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms