Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Gm2423-201ENSMUST00000074863 733 ntBASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb18Q91Y02 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Gm11424-201ENSMUST00000121929 829 ntBASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb18Q91Y02 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Gm9063-201ENSMUST00000223299 582 ntBASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb18Q91Y02 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb18Q91Y02 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms