Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga6Q91XY2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Gm11478-201ENSMUST00000117851 599 ntBASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Gm15487-201ENSMUST00000122373 465 ntBASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Gm8318-201ENSMUST00000182954 872 ntBASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Gm9063-201ENSMUST00000223299 582 ntBASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga6Q91XY2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.58□□□□□ -0.07
Pcdhga6Q91XY2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Pcdhga6Q91XY2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Pcdhga6Q91XY2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhga6Q91XY2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhga6Q91XY2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhga6Q91XY2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Gm14928-201ENSMUST00000120198 477 ntBASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.57□□□□□ -0.08
Pcdhga6Q91XY2 Gm27680-201ENSMUST00000184192 160 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms