Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.72■□□□□ 0.27
Trex1Q91XB0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trex1Q91XB0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trex1Q91XB0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Gm14042-201ENSMUST00000120139 833 ntBASIC16.71■□□□□ 0.27
Trex1Q91XB0 Gm12490-201ENSMUST00000120255 560 ntBASIC16.71■□□□□ 0.27
Trex1Q91XB0 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.71■□□□□ 0.27
Trex1Q91XB0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.71■□□□□ 0.27
Trex1Q91XB0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.71■□□□□ 0.27
Trex1Q91XB0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trex1Q91XB0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.71■□□□□ 0.26
Trex1Q91XB0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Trex1Q91XB0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.7■□□□□ 0.26
Trex1Q91XB0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
Trex1Q91XB0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trex1Q91XB0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Gm10275-202ENSMUST00000168697 495 ntBASIC16.69■□□□□ 0.26
Trex1Q91XB0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Gm6916-202ENSMUST00000205523 195 ntBASIC16.69■□□□□ 0.26
Trex1Q91XB0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.69■□□□□ 0.26
Trex1Q91XB0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Gm10275-201ENSMUST00000092620 635 ntBASIC16.69■□□□□ 0.26
Trex1Q91XB0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.69■□□□□ 0.26
Trex1Q91XB0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.69■□□□□ 0.26
Trex1Q91XB0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trex1Q91XB0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms