Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Odf4Q8VI88 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Odf4Q8VI88 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Odf4Q8VI88 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Gm23935-201ENSMUST00000102303 57 ntBASIC13.14□□□□□ -0.31
Odf4Q8VI88 Gm24270-201ENSMUST00000102326 57 ntBASIC13.14□□□□□ -0.31
Odf4Q8VI88 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Gm24245-201ENSMUST00000157318 57 ntBASIC13.14□□□□□ -0.31
Odf4Q8VI88 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.14□□□□□ -0.31
Odf4Q8VI88 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Gm19164-201ENSMUST00000210667 640 ntBASIC13.14□□□□□ -0.31
Odf4Q8VI88 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.14□□□□□ -0.31
Odf4Q8VI88 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.14□□□□□ -0.31
Odf4Q8VI88 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Odf4Q8VI88 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.13□□□□□ -0.31
Odf4Q8VI88 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.13□□□□□ -0.31
Odf4Q8VI88 Gm15358-201ENSMUST00000119249 520 ntBASIC13.13□□□□□ -0.31
Odf4Q8VI88 Gm17271-201ENSMUST00000165535 355 ntBASIC13.13□□□□□ -0.31
Odf4Q8VI88 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.13□□□□□ -0.31
Odf4Q8VI88 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Odf4Q8VI88 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Gm4899-201ENSMUST00000178708 719 ntBASIC13.12□□□□□ -0.31
Odf4Q8VI88 Mir8117-201ENSMUST00000184773 107 ntBASIC13.12□□□□□ -0.31
Odf4Q8VI88 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Odf4Q8VI88 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms