Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rab40cQ8VHQ4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rab40cQ8VHQ4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rab40cQ8VHQ4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rab40cQ8VHQ4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rab40cQ8VHQ4 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.96□□□□□ -0.5
Rab40cQ8VHQ4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rab40cQ8VHQ4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rab40cQ8VHQ4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.96□□□□□ -0.5
Rab40cQ8VHQ4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rab40cQ8VHQ4 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.96□□□□□ -0.5
Rab40cQ8VHQ4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rab40cQ8VHQ4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Rab40cQ8VHQ4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Gm27704-201ENSMUST00000185094 107 ntBASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rab40cQ8VHQ4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms