Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.05□□□□□ -0.16
Lsm1Q8VC85 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Mir5126-201ENSMUST00000175513 77 ntBASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Gm28659-201ENSMUST00000188013 759 ntBASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Gm2272-201ENSMUST00000194903 582 ntBASIC14.04□□□□□ -0.16
Lsm1Q8VC85 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lsm1Q8VC85 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Mir5131-201ENSMUST00000175426 93 ntBASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Gm2451-201ENSMUST00000199447 999 ntBASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Gm10290-201ENSMUST00000200451 999 ntBASIC14.03□□□□□ -0.16
Lsm1Q8VC85 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm1Q8VC85 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm1Q8VC85 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm1Q8VC85 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Lsm1Q8VC85 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm1Q8VC85 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm1Q8VC85 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.02□□□□□ -0.16
Lsm1Q8VC85 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm1Q8VC85 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.02□□□□□ -0.17
Lsm1Q8VC85 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms