Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc59Q8R2N0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc59Q8R2N0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc59Q8R2N0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc59Q8R2N0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc59Q8R2N0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc59Q8R2N0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc59Q8R2N0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Mir6404-201ENSMUST00000183699 94 ntBASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Gm2651-201ENSMUST00000203560 838 ntBASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Gm10060-201ENSMUST00000212002 111 ntBASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Gm8655-201ENSMUST00000221159 852 ntBASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc59Q8R2N0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm4459-201ENSMUST00000118750 468 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm44357-201ENSMUST00000195897 142 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm19658-201ENSMUST00000196231 138 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm44367-201ENSMUST00000196836 138 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm44350-201ENSMUST00000197197 138 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm44390-201ENSMUST00000197533 144 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm44313-201ENSMUST00000198018 138 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm44486-201ENSMUST00000198508 138 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm44314-201ENSMUST00000199263 138 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm44394-201ENSMUST00000199558 138 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm44484-201ENSMUST00000199873 138 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm44466-201ENSMUST00000200264 138 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gm44359-201ENSMUST00000200671 138 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc59Q8R2N0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc59Q8R2N0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms