Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nudcd3Q8R1N4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.65□□□□□ -0.07
Nudcd3Q8R1N4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Gm12644-201ENSMUST00000119935 606 ntBASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Gm12895-201ENSMUST00000122214 226 ntBASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nudcd3Q8R1N4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nudcd3Q8R1N4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nudcd3Q8R1N4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nudcd3Q8R1N4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms