Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
H2afjQ8R1M2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afjQ8R1M2 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.6□□□□□ -0.23
H2afjQ8R1M2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Gm7153-201ENSMUST00000117092 455 ntBASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Gm15173-201ENSMUST00000122049 433 ntBASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Gm9682-201ENSMUST00000197505 556 ntBASIC13.6□□□□□ -0.23
H2afjQ8R1M2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afjQ8R1M2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Gm11452-201ENSMUST00000122376 690 ntBASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.59□□□□□ -0.23
H2afjQ8R1M2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms