Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc12Q8K5B8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc12Q8K5B8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Mir449b-201ENSMUST00000104833 80 ntBASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Gm13616-201ENSMUST00000120600 222 ntBASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.27□□□□□ -0.45
Hoxc12Q8K5B8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc12Q8K5B8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms