Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Gm26464-201ENSMUST00000157094 305 ntBASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Gm22331-201ENSMUST00000158066 136 ntBASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col23a1Q8K4G2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Gm7783-201ENSMUST00000204795 781 ntBASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col23a1Q8K4G2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Gm27501-201ENSMUST00000183599 107 ntBASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Gm29199-201ENSMUST00000187766 775 ntBASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Gm6983-201ENSMUST00000214912 628 ntBASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col23a1Q8K4G2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col23a1Q8K4G2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col23a1Q8K4G2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col23a1Q8K4G2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Gm11803-201ENSMUST00000119966 444 ntBASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Gm38002-201ENSMUST00000193255 180 ntBASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Gm38266-201ENSMUST00000194931 421 ntBASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Col23a1Q8K4G2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms