Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Gm24589-201ENSMUST00000116692 94 ntBASIC9.22□□□□□ -0.93
Cystm1Q8K353 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC9.22□□□□□ -0.93
Cystm1Q8K353 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Cystm1Q8K353 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.93
Cystm1Q8K353 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC9.21□□□□□ -0.94
Cystm1Q8K353 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC9.21□□□□□ -0.94
Cystm1Q8K353 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Gm28659-201ENSMUST00000188013 759 ntBASIC9.21□□□□□ -0.94
Cystm1Q8K353 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Gm30437-201ENSMUST00000206086 1201 ntBASIC9.21□□□□□ -0.94
Cystm1Q8K353 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Gm42632-201ENSMUST00000201707 2411 ntBASIC9.21□□□□□ -0.94
Cystm1Q8K353 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Cystm1Q8K353 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Gm5049-201ENSMUST00000195878 1590 ntBASIC9.2□□□□□ -0.94
Cystm1Q8K353 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Cystm1Q8K353 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms