Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rp1l1Q8CGM2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rp1l1Q8CGM2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rp1l1Q8CGM2 Gm16177-201ENSMUST00000120728 718 ntBASIC14.93□□□□□ -0.02
Rp1l1Q8CGM2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.93□□□□□ -0.02
Rp1l1Q8CGM2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.93□□□□□ -0.02
Rp1l1Q8CGM2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rp1l1Q8CGM2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rp1l1Q8CGM2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.93□□□□□ -0.02
Rp1l1Q8CGM2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.93□□□□□ -0.02
Rp1l1Q8CGM2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Gm6152-201ENSMUST00000151704 340 ntBASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Gm8810-201ENSMUST00000172895 754 ntBASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Gm37714-201ENSMUST00000194742 342 ntBASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rp1l1Q8CGM2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Proscos-202ENSMUST00000178990 666 ntBASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Gm27243-201ENSMUST00000183964 521 ntBASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Gm38002-201ENSMUST00000193255 180 ntBASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Gm43758-201ENSMUST00000199500 367 ntBASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Gm13385-201ENSMUST00000121089 220 ntBASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Gm43133-201ENSMUST00000197472 463 ntBASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rp1l1Q8CGM2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Mir3547-201ENSMUST00000175461 88 ntBASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rp1l1Q8CGM2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms